# GPN-MSA application to *Homo sapiens*

## Resources
* [Pretrained model, training dataset, benchmark datasets, precomputed scores for all 9 billion possible single-nucleotide variants in the human genome and gene-level essentiality scores](https://huggingface.co/collections/songlab/gpn-msa-65319280c93c85e11c803887)
* [Logo track at UCSC Genome Browser](https://genome.ucsc.edu/s/gbenegas/gpn-msa-sapiens)

## Reproducing the analysis
* Dependencies: `workflow/envs/general.yaml`
* Running Snakemake: `snakemake --cores all`
