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# All Species

Note: to find out which species were in previous releases, please see the table of assemblies

Common name | Scientific name | Taxon ID | Ensembl Assembly | Accession | Genebuild Method | Variation database | Regulation database
--- | --- | --- | --- | --- | --- | --- | ---
Abingdon island giant tortoise | Chelonoidis abingdonii | 106734 | ASM359739v1 | GCA_003597395.1 | Full genebuild | - | -
African ostrich | Struthio camelus australis | 441894 | ASM69896v1 | GCA_000698965.1 | Full genebuild | - | -
Agassiz's desert tortoise | Gopherus agassizii | 38772 | ASM289641v1 | GCA_002896415.1 | Full genebuild | - | -
Algerian mouse | Mus spretus | 10096 | SPRET_EiJ_v1 | GCA_001624865.1 | External annotation import | - | Y
Alpaca | Vicugna pacos | 30538 | vicPac1 | - | A gene build method used by Ensembl for low coverage genomes, allowing genes to be annotated that span two scaffolds by mapping to the human gene.Projection build | - | -
Alpine marmot | Marmota marmota marmota | 9994 | marMar2.1 | GCA_001458135.1 | Full genebuild | - | -
Amazon molly | Poecilia formosa | 48698 | Poecilia_formosa-5.1.2 | GCA_000485575.1 | Full genebuild | - | -
American beaver | Castor canadensis | 51338 | C.can_genome_v1.0 | GCA_001984765.1 | Full genebuild | - | -
American bison | Bison bison bison | 43346 | Bison_UMD1.0 | GCA_000754665.1 | Full genebuild | - | -
American black bear | Ursus americanus | 9643 | ASM334442v1 | GCA_003344425.1 | Full genebuild | - | -
American mink | Neovison vison | 452646 | NNQGG.v01 | GCA_900108605.1 | Full genebuild | Y | -
Angola colobus | Colobus angolensis palliatus | 336983 | Cang.pa_1.0 | GCA_000951035.1 | Full genebuild | - | Y
Arabian camel | Camelus dromedarius | 9838 | CamDro2 | GCA_000803125.2 | Full genebuild | - | -
Arctic ground squirrel | Urocitellus parryii | 9999 | ASM342692v1 | GCA_003426925.1 | Full genebuild | - | -
Argentine black and white tegu | Salvator merianae | 96440 | HLtupMer3 | GCA_003586115.1 | Full genebuild | - | -
Armadillo | Dasypus novemcinctus | 9361 | Dasnov3.0 | GCA_000208655.2 | Mixed strategy build | - | -
Asian bonytongue | Scleropages formosus | 113540 | fSclFor1.1 | GCA_900964775.1 | Full genebuild | - | -
Asiatic black bear | Ursus thibetanus thibetanus | 441215 | ASM966005v1 | GCA_009660055.1 | Full genebuild | - | -
Atlantic cod | Gadus morhua | 8049 | gadMor3.0 | GCA_902167405.1 | Full genebuild | - | -
Atlantic herring | Clupea harengus | 7950 | Ch_v2.0.2 | GCA_900700415.1 | Full genebuild | - | -
Atlantic salmon | Salmo salar | 8030 | Ssal_v3.1 | GCA_905237065.2 | Full genebuild | Y | Y
Australian saltwater crocodile | Crocodylus porosus | 8502 | CroPor_comp1 | GCA_001723895.1 | Full genebuild | - | -
Ballan wrasse | Labrus bergylta | 56723 | BallGen_V1 | GCA_900080235.1 | Full genebuild | - | -
Barramundi perch | Lates calcarifer | 8187 | ASB_HGAPassembly_v1 | GCA_900066035.1 | Full genebuild | - | -
Beluga whale | Delphinapterus leucas | 9749 | ASM228892v3 | GCA_002288925.3 | Full genebuild | - | -
Bengalese finch | Lonchura striata domestica | 299123 | LonStrDom1 | GCA_002197715.1 | Full genebuild | - | -
Bicolor damselfish | Stegastes partitus | 144197 | Stegastes_partitus-1.0.2 | GCA_000690725.1 | Full genebuild | - | -
Black snub-nosed monkey | Rhinopithecus bieti | 61621 | ASM169854v1 | GCA_001698545.1 | Full genebuild | - | Y
Blind barbel | Sinocyclocheilus anshuiensis | 1608454 | SAMN03320099.WGS_v1.1 | GCA_001515605.1 | Full genebuild | - | -
Blue tilapia | Oreochromis aureus | 47969 | ASM587006v1 | GCA_005870065.1 | Full genebuild | - | -
Blue tit | Cyanistes caeruleus | 156563 | cyaCae2 | GCA_002901205.1 | Full genebuild | - | -
Blue whale | Balaenoptera musculus | 9771 | mBalMus1.v2 | GCA_009873245.2 | Full genebuild | - | -
Blue-crowned manakin | Lepidothrix coronata | 321398 | Lepidothrix_coronata-1.0 | GCA_001604755.1 | Full genebuild | - | -
Blue-ringed sea krait | Laticauda laticaudata | 8630 | latLat_1.0 | GCA_004320025.1 | Full genebuild | - | -
Blunt-snouted clingfish | Gouania willdenowi | 441366 | fGouWil2.1 | GCA_900634775.1 | Full genebuild | - | -
Bolivian squirrel monkey | Saimiri boliviensis boliviensis | 39432 | SaiBol1.0 | GCA_000235385.1 | Full genebuild | - | Y
Bonobo | Pan paniscus | 9597 | panpan1.1 | GCA_000258655.2 | Full genebuild | - | Y
Brazilian guinea pig | Cavia aperea | 37548 | CavAp1.0 | GCA_000688575.1 | Full genebuild | - | -
Brown trout | Salmo trutta | 8032 | fSalTru1.1 | GCA_901001165.1 | Full genebuild | - | -
Budgerigar | Melopsittacus undulatus | 13146 | bMelUnd1.mat.Z | GCA_012275295.1 | Full genebuild | - | -
Burrowing owl | Athene cunicularia | 194338 | athCun1 | GCA_003259725.1 | Full genebuild | - | -
Burton's mouthbrooder | Haplochromis burtoni | 8153 | AstBur1.0 | GCA_000239415.1 | Full genebuild | - | -
Bushbaby | Otolemur garnettii | 30611 | OtoGar3 | GCA_000181295.3 | Full genebuild | - | -
C.intestinalis | Ciona intestinalis | 7719 | KH | GCA_000224145.1 | Full genebuild | Y | Y
C.savignyi | Ciona savignyi | 51511 | CSAV 2.0 | - | Full genebuild | - | -
Caenorhabditis elegans (Nematode, N2) | Caenorhabditis elegans | 6239 | WBcel235 | GCA_000002985.3 | Import | - | Y
California sea lion | Zalophus californianus | 9704 | mZalCal1.pri | GCA_009762305.1 | Full genebuild | - | -
Canada lynx | Lynx canadensis | 61383 | mLynCan4_v1.p | GCA_007474595.1 | Full genebuild | - | -
Cat | Felis catus | 9685 | Felis_catus_9.0 | GCA_000181335.4 | Full genebuild | Y | Y
Central bearded dragon | Pogona vitticeps | 103695 | pvi1.1 | GCA_900067755.1 | Full genebuild | - | -
Chacoan peccary | Catagonus wagneri | 51154 | CatWag_v2_BIUU_UCD | GCA_004024745.2 | Full genebuild | - | -
Channel bull blenny | Cottoperca gobio | 56716 | fCotGob3.1 | GCA_900634415.1 | Full genebuild | - | -
Channel catfish | Ictalurus punctatus | 7998 | IpCoco_1.2 | GCA_001660625.1 | Full genebuild | - | Y
Chicken | Gallus gallus | 9031 | bGalGal1.mat.broiler.GRCg7b | GCA_016699485.1 | Full genebuild | Y | Y
Chicken (Red Jungle fowl) | Gallus gallus | 9031 | GRCg6a | GCA_000002315.5 | Full genebuild | Y | Y
Chicken (paternal White leghorn layer) | Gallus gallus | 9031 | bGalGal1.pat.whiteleghornlayer.GRCg7w | GCA_016700215.2 | Full genebuild | - | -
Chilean tinamou | Nothoprocta perdicaria | 30464 | notPer1 | GCA_003342845.1 | Full genebuild | - | -
Chimpanzee | Pan troglodytes | 9598 | Pan_tro_3.0 | GCA_000001515.5 | Full genebuild | Y | Y
Chinese hamster CHOK1GS | Cricetulus griseus | 10029 | CHOK1GS_HDv1 | GCA_900186095.1 | Full genebuild | - | Y
Chinese hamster CriGri | Cricetulus griseus | 10029 | CriGri_1.0 | GCA_000223135.1 | Full genebuild | - | Y
Chinese hamster PICR | Cricetulus griseus | 10029 | CriGri-PICRH-1.0 | GCA_003668045.2 | Full genebuild | - | -
Chinese medaka | Oryzias sinensis | 183150 | ASM858656v1 | GCA_008586565.1 | Full genebuild | - | -
Chinese softshell turtle | Pelodiscus sinensis | 13735 | PelSin_1.0 | GCA_000230535.1 | Mixed strategy build | - | -
Chinook salmon | Oncorhynchus tshawytscha | 74940 | Otsh_v1.0 | GCA_002872995.1 | Full genebuild | - | -
Climbing perch | Anabas testudineus | 64144 | fAnaTes1.2 | GCA_900324465.2 | Full genebuild | - | -
Clown anemonefish | Amphiprion ocellaris | 80972 | AmpOce1.0 | GCA_002776465.1 | Full genebuild | - | -
Coelacanth | Latimeria chalumnae | 7897 | LatCha1 | GCA_000225785.1 | Full genebuild | - | -
Coho salmon | Oncorhynchus kisutch | 8019 | Okis_V2 | GCA_002021735.2 | Full genebuild | - | -
Collared flycatcher | Ficedula albicollis | 59894 | FicAlb1.5 | GCA_000247815.2 | Full genebuild | Y | -
Common canary | Serinus canaria | 9135 | SCA1 | GCA_000534875.1 | Full genebuild | - | -
Common carp | Cyprinus carpio carpio | 630221 | Cypcar_WagV4.0 | GCA_905221575.1 | Full genebuild | - | Y
Common carp german mirror | Cyprinus carpio | 7962 | German_Mirror_carp_1.0 | GCA_004011555.1 | Full genebuild | - | -
Common carp hebao red | Cyprinus carpio | 7962 | Hebao_red_carp_1.0 | GCA_004011595.1 | Full genebuild | - | -
Common carp huanghe | Cyprinus carpio | 7962 | Hunaghe_carp_2.0 | GCA_004011575.1 | Full genebuild | - | -
Common kestrel | Falco tinnunculus | 100819 | FalTin1.0 | GCA_010332995.1 | Full genebuild | - | -
Common snapping turtle | Chelydra serpentina | 8475 | Chelydra_serpentina-1.0 | GCA_007922165.1 | Full genebuild | - | -
Common wall lizard | Podarcis muralis | 64176 | PodMur_1.0 | GCA_004329235.1 | Full genebuild | - | -
Common wombat | Vombatus ursinus | 29139 | bare-nosed_wombat_genome_assembly | GCA_900497805.2 | Full genebuild | - | -
Coquerel's sifaka | Propithecus coquereli | 379532 | Pcoq_1.0 | GCA_000956105.1 | Full genebuild | - | Y
Cow | Bos taurus | 9913 | ARS-UCD1.3 | GCA_002263795.3 | Full genebuild | Y | -
Crab-eating macaque | Macaca fascicularis | 9541 | Macaca_fascicularis_6.0 | GCA_011100615.1 | Full genebuild | Y | -
Damara mole rat | Fukomys damarensis | 885580 | DMR_v1.0 | GCA_000743615.1 | Full genebuild | - | -
Dark-eyed junco | Junco hyemalis | 40217 | ASM382977v1 | GCA_003829775.1 | Full genebuild | - | -
Daurian ground squirrel | Spermophilus dauricus | 99837 | ASM240643v1 | GCA_002406435.1 | Full genebuild | - | -
Degu | Octodon degus | 10160 | OctDeg1.0 | GCA_000260255.1 | Full genebuild | - | -
Denticle herring | Denticeps clupeoides | 299321 | fDenClu1.1 | GCA_900700375.1 | Full genebuild | - | -
Dingo | Canis lupus dingo | 286419 | ASM325472v1 | GCA_003254725.1 | Full genebuild | - | -
Dog | Canis lupus familiaris | 9615 | ROS_Cfam_1.0 | GCA_014441545.1 | Full genebuild | Y | Y
Dog - Basenji | Canis lupus familiaris | 9615 | Basenji_breed-1.1 | GCA_004886185.1 | Full genebuild | - | Y
Dog - Boxer | Canis lupus familiaris | 9615 | Dog10K_Boxer_Tasha | GCA_000002285.4 | Full genebuild | Y | Y
Dog - German Shepherd | Canis lupus familiaris | 9615 | UU_Cfam_GSD_1.0 | GCA_011100685.1 | Full genebuild | - | -
Dog - Great Dane | Canis lupus familiaris | 9615 | UMICH_Zoey_3.1 | GCA_005444595.1 | Full genebuild | - | Y
Dolphin | Tursiops truncatus | 9739 | turTru1 | - | A gene build method used by Ensembl for low coverage genomes, allowing genes to be annotated that span two scaffolds by mapping to the human gene.Projection build | - | -
Domestic yak | Bos grunniens | 30521 | LU_Bosgru_v3.0 | GCA_005887515.1 | Full genebuild | Y | -
Donkey | Equus asinus | 9793 | ASM1607732v2 | GCA_016077325.2 | Full genebuild | - | -
Drill | Mandrillus leucophaeus | 9568 | Mleu.le_1.0 | GCA_000951045.1 | Full genebuild | - | Y
Drosophila melanogaster (Fruit fly) | Drosophila melanogaster | 7227 | BDGP6.46 | GCA_000001215.4 | Import | Y | Y
Duck | Anas platyrhynchos platyrhynchos | 8840 | CAU_duck1.0 | GCA_002743455.1 | Full genebuild | - | Y
Eastern brown snake | Pseudonaja textilis | 8673 | EBS10Xv2-PRI | GCA_900518735.1 | Full genebuild | - | -
Eastern buzzard | Buteo japonicus | 224669 | ButJap1.0 | GCA_010312235.1 | Full genebuild | - | -
Eastern happy | Astatotilapia calliptera | 8154 | fAstCal1.2 | GCA_900246225.3 | Full genebuild | - | -
Eastern spot-billed duck | Anas zonorhyncha | 75864 | ASM222487v1 | GCA_002224875.1 | Full genebuild | - | -
Electric eel | Electrophorus electricus | 8005 | Ee_SOAP_WITH_SSPACE | GCA_003665695.2 | Full genebuild | - | -
Elephant | Loxodonta africana | 9785 | Loxafr3.0 | GCA_000001905.1 | Full genebuild | - | -
Elephant shark | Callorhinchus milii | 7868 | Callorhinchus_milii-6.1.3 | GCA_000165045.2 | Full genebuild | - | -
Emu | Dromaius novaehollandiae | 8790 | droNov1 | GCA_003342905.1 | Full genebuild | - | -
Eurasian eagle-owl | Bubo bubo | 30461 | BubBub1.0 | GCA_010303855.1 | Full genebuild | - | -
Eurasian red squirrel | Sciurus vulgaris | 55149 | mSciVul1.1 | GCA_902686455.1 | Full genebuild | - | -
Eurasian sparrowhawk | Accipiter nisus | 211598 | Accipiter_nisus_ver1.0 | GCA_004320145.1 | Full genebuild | - | -
European seabass | Dicentrarchus labrax | 13489 | dlabrax2021 | GCA_905237075.1 | Full genebuild | - | Y
Ferret | Mustela putorius furo | 9669 | MusPutFur1.0 | GCA_000215625.1 | Mixed strategy build | - | -
Fugu | Takifugu rubripes | 31033 | fTakRub1.2 | GCA_901000725.2 | Full genebuild | - | -
Gelada | Theropithecus gelada | 9565 | Tgel_1.0 | GCA_003255815.1 | Full genebuild | - | Y
Giant panda | Ailuropoda melanoleuca | 9646 | ASM200744v2 | GCA_002007445.2 | Full genebuild | - | -
Gibbon | Nomascus leucogenys | 61853 | Nleu_3.0 | GCA_000146795.3 | Full genebuild | Y | Y
Gilthead seabream | Sparus aurata | 8175 | fSpaAur1.1 | GCA_900880675.1 | Full genebuild | - | -
Goat | Capra hircus | 9925 | ARS1 | GCA_001704415.1 | Full genebuild | Y | Y
Goat (black bengal) | Capra hircus | 9925 | CVASU_BBG_1.0 | GCA_004361675.1 | Full genebuild | - | -
Golden Hamster | Mesocricetus auratus | 10036 | MesAur1.0 | GCA_000349665.1 | Full genebuild | - | Y
Golden eagle | Aquila chrysaetos chrysaetos | 223781 | bAquChr1.2 | GCA_900496995.2 | Full genebuild | - | -
Golden pheasant | Chrysolophus pictus | 9089 | Chrysolophus_pictus_GenomeV1.0 | GCA_003413605.1 | Full genebuild | - | -
Golden snub-nosed monkey | Rhinopithecus roxellana | 61622 | Rrox_v1 | GCA_000769185.1 | Full genebuild | - | Y
Golden-collared manakin | Manacus vitellinus | 328815 | ASM171598v2 | GCA_001715985.2 | Full genebuild | - | -
Golden-line barbel | Sinocyclocheilus grahami | 75366 | SAMN03320097.WGS_v1.1 | GCA_001515645.1 | Full genebuild | - | -
Goldfish | Carassius auratus | 7957 | ASM336829v1 | GCA_003368295.1 | Full genebuild | - | -
Goodes thornscrub tortoise | Gopherus evgoodei | 1825980 | rGopEvg1_v1.p | GCA_007399415.1 | Full genebuild | - | -
Gorilla | Gorilla gorilla gorilla | 9595 | gorGor4 | GCA_000151905.3 | Full genebuild | - | Y
Gouldian finch | Erythrura gouldiae | 44316 | GouldianFinch | GCA_003676055.1 | Full genebuild | - | -
Great Tit | Parus major | 9157 | Parus_major1.1 | GCA_001522545.2 | Full genebuild | Y | -
Great spotted kiwi | Apteryx haastii | 8823 | aptHaa1 | GCA_003342985.1 | Full genebuild | - | -
Greater amberjack | Seriola dumerili | 41447 | Sdu_1.0 | GCA_002260705.1 | Full genebuild | Y | -
Greater bamboo lemur | Prolemur simus | 1328070 | Prosim_1.0 | GCA_003258685.1 | Full genebuild | - | Y
Greater horseshoe bat | Rhinolophus ferrumequinum | 59479 | mRhiFer1_v1.p | GCA_004115265.2 | Full genebuild | - | -
Green anole | Anolis carolinensis | 28377 | AnoCar2.0v2 | GCA_000090745.2 | Full genebuild | - | -
Guinea Pig | Cavia porcellus | 10141 | Cavpor3.0 | GCA_000151735.1 | Full genebuild | - | Y
Guppy | Poecilia reticulata | 8081 | Guppy_female_1.0_MT | GCA_000633615.2 | Full genebuild | - | -
Hagfish | Eptatretus burgeri | 7764 | Eburgeri_3.2 | GCA_900186335.2 | Full genebuild | - | -
Hedgehog | Erinaceus europaeus | 9365 | eriEur1 | - | A gene build method used by Ensembl for low coverage genomes, allowing genes to be annotated that span two scaffolds by mapping to the human gene.Projection build | - | -
Helmeted guineafowl | Numida meleagris | 8996 | NumMel1.0 | GCA_002078875.2 | Full genebuild | - | -
Horned golden-line barbel | Sinocyclocheilus rhinocerous | 307959 | SAMN03320098_v1.1 | GCA_001515625.1 | Full genebuild | - | -
Horse | Equus caballus | 9796 | EquCab3.0 | GCA_002863925.1 | Full genebuild | Y | Y
Huchen | Hucho hucho | 62062 | ASM331708v1 | GCA_003317085.1 | Full genebuild | - | -
Human | Homo sapiens | 9606 | GRCh38.p14 | GCA_000001405.29 | Full genebuild | Y | Y
Hybrid - Bos Indicus | Bos indicus x Bos taurus | 30522 | UOA_Brahman_1 | GCA_003369695.2 | Full genebuild | - | -
Hybrid - Bos Taurus | Bos indicus x Bos taurus | 30522 | UOA_Angus_1 | GCA_003369685.2 | Full genebuild | - | -
Hyrax | Procavia capensis | 9813 | proCap1 | - | A gene build method used by Ensembl for low coverage genomes, allowing genes to be annotated that span two scaffolds by mapping to the human gene.Projection build | - | -
Indian cobra | Naja naja | 35670 | Nana_v5 | GCA_009733165.1 | Full genebuild | - | -
Indian glassy fish | Parambassis ranga | 210632 | fParRan2.1 | GCA_900634625.1 | Full genebuild | - | -
Indian medaka | Oryzias melastigma | 30732 | Om_v0.7.RACA | GCA_002922805.1 | Full genebuild | - | -
Indian peafowl | Pavo cristatus | 9049 | AIIM_Pcri_1.0 | GCA_005519975.1 | Full genebuild | - | -
Japanese medaka HNI | Oryzias latipes | 8090 | ASM223471v1 | GCA_002234715.1 | Full genebuild | - | -
Japanese medaka HSOK | Oryzias latipes | 8090 | ASM223469v1 | GCA_002234695.1 | Full genebuild | - | -
Japanese medaka HdrR | Oryzias latipes | 8090 | ASM223467v1 | GCA_002234675.1 | Full genebuild | - | -
Japanese quail | Coturnix japonica | 93934 | Coturnix_japonica_2.0 | GCA_001577835.1 | Full genebuild | Y | -
Javanese ricefish | Oryzias javanicus | 123683 | OJAV_1.1 | GCA_003999625.1 | Full genebuild | - | -
Jewelled blenny | Salarias fasciatus | 181472 | fSalaFa1.1 | GCA_902148845.1 | Full genebuild | - | -
Kakapo | Strigops habroptila | 2489341 | bStrHab1_v1.p | GCA_004027225.1 | Full genebuild | - | -
Kangaroo rat | Dipodomys ordii | 10020 | Dord_2.0 | GCA_000151885.2 | Full genebuild | - | -
Koala | Phascolarctos cinereus | 38626 | phaCin_unsw_v4.1 | GCA_002099425.1 | Full genebuild | - | -
Komodo dragon | Varanus komodoensis | 61221 | ASM479886v1 | GCA_004798865.1 | Full genebuild | - | -
Lamprey | Petromyzon marinus | 7757 | Pmarinus_7.0 | - | Full genebuild | - | -
Large yellow croaker | Larimichthys crocea | 215358 | L_crocea_2.0 | GCA_000972845.2 | Full genebuild | - | -
Leishan spiny toad | Leptobrachium leishanense | 445787 | ASM966780v1 | GCA_009667805.1 | Full genebuild | - | -
Leopard | Panthera pardus | 9691 | PanPar1.0 | GCA_001857705.1 | Full genebuild | - | -
Lesser Egyptian jerboa | Jaculus jaculus | 51337 | JacJac1.0 | GCA_000280705.1 | Full genebuild | - | -
Lesser hedgehog tenrec | Echinops telfairi | 9371 | TENREC | - | A gene build method used by Ensembl for low coverage genomes, allowing genes to be annotated that span two scaffolds by mapping to the human gene.Projection build | - | -
Lion | Panthera leo | 9689 | PanLeo1.0 | GCA_008795835.1 | Full genebuild | - | -
Little spotted kiwi | Apteryx owenii | 8824 | aptOwe1 | GCA_003342965.1 | Full genebuild | - | -
Live sharksucker | Echeneis naucrates | 173247 | fEcheNa1.1 | GCA_900963305.1 | Full genebuild | - | -
Long-tailed chinchilla | Chinchilla lanigera | 34839 | ChiLan1.0 | GCA_000276665.1 | Full genebuild | - | -
Lumpfish | Cyclopterus lumpus | 8103 | fCycLum1.pri | GCA_009769545.1 | Full genebuild | - | -
Lyretail cichlid | Neolamprologus brichardi | 32507 | NeoBri1.0 | GCA_000239395.1 | Full genebuild | - | -
Ma's night monkey | Aotus nancymaae | 37293 | Anan_2.0 | GCA_000952055.2 | Full genebuild | - | Y
Macaque | Macaca mulatta | 9544 | Mmul_10 | GCA_003339765.3 | Full genebuild | Y | Y
Mainland tiger snake | Notechis scutatus | 8663 | TS10Xv2-PRI | GCA_900518725.1 | Full genebuild | - | -
Makobe Island cichlid | Pundamilia nyererei | 303518 | PunNye1.0 | GCA_000239375.1 | Full genebuild | - | -
Mallard | Anas platyrhynchos | 8839 | ASM874695v1 | GCA_008746955.1 | Full genebuild | Y | -
Mangrove rivulus | Kryptolebias marmoratus | 37003 | ASM164957v1 | GCA_001649575.1 | Full genebuild | - | -
Medium ground-finch | Geospiza fortis | 48883 | GeoFor_1.0 | GCA_000277835.1 | Full genebuild | - | -
Meerkat | Suricata suricatta | 37032 | meerkat_22Aug2017_6uvM2_HiC | GCA_006229205.1 | Full genebuild | - | -
Megabat | Pteropus vampyrus | 132908 | pteVam1 | - | A gene build method used by Ensembl for low coverage genomes, allowing genes to be annotated that span two scaffolds by mapping to the human gene.Projection build | - | -
Mexican tetra | Astyanax mexicanus | 7994 | Astyanax_mexicanus-2.0 | GCA_000372685.2 | Full genebuild | - | -
Microbat | Myotis lucifugus | 59463 | Myoluc2.0 | GCA_000147115.1 | Full genebuild | - | -
Midas cichlid | Amphilophus citrinellus | 61819 | Midas_v5 | GCA_000751415.1 | Full genebuild | - | -
Mongolian gerbil | Meriones unguiculatus | 10047 | MunDraft-v1.0 | GCA_002204375.1 | Full genebuild | - | -
Monterrey platyfish | Xiphophorus couchianus | 32473 | Xiphophorus_couchianus-4.0.1 | GCA_001444195.1 | Full genebuild | - | -
Mouse | Mus musculus | 10090 | GRCm39 | GCA_000001635.9 | Full genebuild | Y | Y
Mouse 129S1/SvImJ | Mus musculus | 10090 | 129S1_SvImJ_v1 | GCA_001624185.1 | External annotation import | - | Y
Mouse A/J | Mus musculus | 10090 | A_J_v1 | GCA_001624215.1 | External annotation import | - | Y
Mouse AKR/J | Mus musculus | 10090 | AKR_J_v1 | GCA_001624295.1 | External annotation import | - | Y
Mouse BALB/cJ | Mus musculus | 10090 | BALB_cJ_v1 | GCA_001632525.1 | External annotation import | - | Y
Mouse C3H/HeJ | Mus musculus | 10090 | C3H_HeJ_v1 | GCA_001632575.1 | External annotation import | - | Y
Mouse C57BL/6NJ | Mus musculus | 10090 | C57BL_6NJ_v1 | GCA_001632555.1 | External annotation import | - | Y
Mouse CAST/EiJ | Mus musculus castaneus | 10091 | CAST_EiJ_v1 | GCA_001624445.1 | External annotation import | - | Y
Mouse CBA/J | Mus musculus | 10090 | CBA_J_v1 | GCA_001624475.1 | External annotation import | - | Y
Mouse DBA/2J | Mus musculus | 10090 | DBA_2J_v1 | GCA_001624505.1 | External annotation import | - | Y
Mouse FVB/NJ | Mus musculus | 10090 | FVB_NJ_v1 | GCA_001624535.1 | External annotation import | - | Y
Mouse LP/J | Mus musculus | 10090 | LP_J_v1 | GCA_001632615.1 | External annotation import | - | Y
Mouse Lemur | Microcebus murinus | 30608 | Mmur_3.0 | GCA_000165445.3 | Full genebuild | - | Y
Mouse NOD/ShiLtJ | Mus musculus | 10090 | NOD_ShiLtJ_v1 | GCA_001624675.1 | External annotation import | - | Y
Mouse NZO/HlLtJ | Mus musculus | 10090 | NZO_HlLtJ_v1 | GCA_001624745.1 | External annotation import | - | Y
Mouse PWK/PhJ | Mus musculus musculus | 39442 | PWK_PhJ_v1 | GCA_001624775.1 | External annotation import | - | Y
Mouse WSB/EiJ | Mus musculus domesticus | 10092 | WSB_EiJ_v1 | GCA_001624835.1 | External annotation import | - | Y
Mummichog | Fundulus heteroclitus | 8078 | Fundulus_heteroclitus-3.0.2 | GCA_000826765.1 | Full genebuild | - | Y
Muscovy Duck (domestic type) | Cairina moschata domestica | 1240228 | CaiMos1.0 | GCA_009194515.1 | Full genebuild | - | -
Naked mole-rat female | Heterocephalus glaber | 10181 | Naked_mole-rat_maternal | GCA_944319715.1 | Full genebuild | - | -
Naked mole-rat male | Heterocephalus glaber | 10181 | Naked_mole-rat_paternal | GCA_944319725.1 | Full genebuild | - | -
Narwhal | Monodon monoceros | 40151 | NGI_Narwhal_1 | GCA_005190385.2 | Full genebuild | - | -
New Caledonian crow | Corvus moneduloides | 1196302 | bCorMon1.pri | GCA_009650955.1 | Full genebuild | - | -
Nile tilapia | Oreochromis niloticus | 8128 | O_niloticus_UMD_NMBU | GCA_001858045.3 | Full genebuild | Y | -
Northern American deer mouse | Peromyscus maniculatus bairdii | 230844 | HU_Pman_2.1 | GCA_003704035.1 | Full genebuild | - | -
Northern pike | Esox lucius | 8010 | Eluc_v4 | GCA_004634155.1 | Full genebuild | - | -
Northern spotted owl | Strix occidentalis caurina | 311401 | Soccid_v01 | GCA_002372975.1 | Full genebuild | - | -
Ocean sunfish | Mola mola | 94237 | ASM169857v1 | GCA_001698575.1 | Full genebuild | - | -
Okarito brown kiwi | Apteryx rowi | 308060 | aptRow1 | GCA_003343035.1 | Full genebuild | - | -
Olive baboon | Papio anubis | 9555 | Panubis1.0 | GCA_008728515.1 | Full genebuild | - | Y
Opossum | Monodelphis domestica | 13616 | ASM229v1 | GCA_000002295.1 | Full genebuild | Y | -
Orange clownfish | Amphiprion percula | 161767 | Nemo_v1 | GCA_003047355.1 | Full genebuild | - | -
Orbiculate cardinalfish | Sphaeramia orbicularis | 375764 | fSphaOr1.1 | GCA_902148855.1 | Full genebuild | - | -
Oriental scops-owl | Otus sunia | 257818 | OtuSun1.0 | GCA_010365825.1 | Full genebuild | - | -
Pachon cavefish | Astyanax mexicanus | 7994 | Astyanax_mexicanus-1.0.2 | GCA_004802775.1 | Full genebuild | - | -
Painted turtle | Chrysemys picta bellii | 8478 | Chrysemys_picta_bellii-3.0.3 | GCA_000241765.2 | Full genebuild | - | -
Panamanian white-faced capuchin | Cebus imitator | 2715852 | Cebus_imitator-1.0 | GCA_001604975.1 | Full genebuild | - | -
P. kingsleyae | Paramormyrops kingsleyae | 1676925 | PKINGS_0.1 | GCA_002872115.1 | Full genebuild | - | -
P. magnuspinnatus | Periophthalmus magnuspinnatus | 409849 | PM.fa | GCA_000787105.1 | Full genebuild | - | -
Pig | Sus scrofa | 9823 | Sscrofa11.1 | GCA_000003025.6 | Full genebuild | Y | Y
Pig - Bamei | Sus scrofa | 9823 | Bamei_pig_v1 | GCA_001700235.1 | Full genebuild | - | -
Pig - Berkshire | Sus scrofa | 9823 | Berkshire_pig_v1 | GCA_001700575.1 | Full genebuild | - | -
Pig - Hampshire | Sus scrofa | 9823 | Hampshire_pig_v1 | GCA_001700165.1 | Full genebuild | - | -
Pig - Jinhua | Sus scrofa | 9823 | Jinhua_pig_v1 | GCA_001700295.1 | Full genebuild | - | -
Pig - Landrace | Sus scrofa | 9823 | Landrace_pig_v1 | GCA_001700215.1 | Full genebuild | - | -
Pig - Largewhite | Sus scrofa | 9823 | Large_White_v1 | GCA_001700135.1 | Full genebuild | - | -
Pig - Meishan | Sus scrofa | 9823 | Meishan_pig_v1 | GCA_001700195.1 | Full genebuild | - | -
Pig - Pietrain | Sus scrofa | 9823 | Pietrain_pig_v1 | GCA_001700255.1 | Full genebuild | - | -
Pig - Rongchang | Sus scrofa | 9823 | Rongchang_pig_v1 | GCA_001700155.1 | Full genebuild | - | -
Pig - Tibetan | Sus scrofa | 9823 | Tibetan_Pig_v2 | GCA_000472085.2 | Full genebuild | - | -
Pig - Wuzhishan | Sus scrofa | 9823 | minipig_v1.0 | GCA_000325925.2 | Full genebuild | - | -
Pig USMARC | Sus scrofa | 9823 | USMARCv1.0 | GCA_002844635.1 | Full genebuild | - | -
Pig-tailed macaque | Macaca nemestrina | 9545 | Mnem_1.0 | GCA_000956065.1 | Full genebuild | - | Y
Pika | Ochotona princeps | 9978 | OchPri2.0-Ens | - | A gene build method used by Ensembl for low coverage genomes, allowing genes to be annotated that span two scaffolds by mapping to the human gene.Projection build | - | -
Pike-perch | Sander lucioperca | 283035 | SLUC_FBN_1 | GCA_008315115.1 | Full genebuild | Y | -
Pinecone soldierfish | Myripristis murdjan | 586833 | fMyrMur1.1 | GCA_902150065.1 | Full genebuild | - | -
Pink-footed goose | Anser brachyrhynchus | 132585 | ASM259213v1 | GCA_002592135.1 | Full genebuild | - | -
Platyfish | Xiphophorus maculatus | 8083 | X_maculatus-5.0-male | GCA_002775205.2 | Full genebuild | - | -
Platypus | Ornithorhynchus anatinus | 9258 | mOrnAna1.p.v1 | GCA_004115215.2 | Full genebuild | Y | Y
Polar bear | Ursus maritimus | 29073 | UrsMar_1.0 | GCA_000687225.1 | Full genebuild | - | -
Prairie vole | Microtus ochrogaster | 79684 | MicOch1.0 | GCA_000317375.1 | Full genebuild | Y | -
Rabbit | Oryctolagus cuniculus | 9986 | OryCun2.0 | GCA_000003625.1 | Full genebuild | Y | Y
Rainbow trout | Oncorhynchus mykiss | 8022 | USDA_OmykA_1.1 | GCA_013265735.3 | Full genebuild | Y | Y
Rat | Rattus norvegicus | 10116 | mRatBN7.2 | GCA_015227675.2 | Full genebuild | Y | Y
Rat - SHR/Utx RGD_8142385 | Rattus norvegicus | 10116 | UTH_Rnor_SHR_Utx | GCA_023515785.1 | Full genebuild | - | -
Rat - SHRSP/BbbUtx | Rattus norvegicus | 10116 | UTH_Rnor_SHRSP_BbbUtx_1.0 | GCA_021556685.1 | Full genebuild | - | -
Rat - WKY/Bbb RGD_1581635 | Rattus norvegicus | 10116 | UTH_Rnor_WKY_Bbb_1.0 | GCA_023515805.1 | Full genebuild | - | -
Red fox | Vulpes vulpes | 9627 | VulVul2.2 | GCA_003160815.1 | Full genebuild | - | -
Red-bellied piranha | Pygocentrus nattereri | 42514 | Pygocentrus_nattereri-1.0.2 | GCA_001682695.1 | Full genebuild | - | -
Reedfish | Erpetoichthys calabaricus | 27687 | fErpCal1.1 | GCA_900747795.2 | Full genebuild | - | -
Ring-necked pheasant | Phasianus colchicus | 9054 | ASM414374v1 | GCA_004143745.1 | Full genebuild | - | -
Round goby | Neogobius melanostomus | 47308 | RGoby_Basel_V2 | GCA_007210695.1 | Full genebuild | - | -
Ruff | Calidris pugnax | 198806 | ASM143184v1 | GCA_001431845.1 | Full genebuild | - | -
Rufous-capped babbler | Cyanoderma ruficeps | 181631 | ASM869450v1 | GCA_008694505.1 | Full genebuild | - | -
Ryukyu mouse | Mus caroli | 10089 | CAROLI_EIJ_v1.1 | GCA_900094665.2 | External annotation import | - | -
Saccharomyces cerevisiae | Saccharomyces cerevisiae S288c | 559292 | R64-1-1 | GCA_000146045.2 | Import | Y | Y
Sailfin molly | Poecilia latipinna | 48699 | P_latipinna-1.0 | GCA_001443285.1 | Full genebuild | - | -
Sheep | Ovis aries | 9940 | ARS-UI_Ramb_v2.0 | GCA_016772045.1 | Full genebuild | Y | -
Sheep (texel) | Ovis aries | 9940 | Oar_v3.1 | GCA_000298735.1 | Mixed strategy build | Y | -
Sheepshead minnow | Cyprinodon variegatus | 28743 | C_variegatus-1.0 | GCA_000732505.1 | Full genebuild | - | Y
Shortfin molly | Poecilia mexicana | 48701 | P_mexicana-1.0 | GCA_001443325.1 | Full genebuild | - | -
Shrew | Sorex araneus | 42254 | sorAra1 | - | A gene build method used by Ensembl for low coverage genomes, allowing genes to be annotated that span two scaffolds by mapping to the human gene.Projection build | - | -
Shrew mouse | Mus pahari | 10093 | PAHARI_EIJ_v1.1 | GCA_900095145.2 | External annotation import | - | -
Siamese fighting fish | Betta splendens | 158456 | fBetSpl5.2 | GCA_900634795.2 | Full genebuild | - | -
Siberian musk deer | Moschus moschiferus | 68415 | MosMos_v2_BIUU_UCD | GCA_004024705.2 | Full genebuild | - | -
Silver-eye | Zosterops lateralis melanops | 1220523 | ASM128173v1 | GCA_001281735.1 | Full genebuild | - | -
Sloth | Choloepus hoffmanni | 9358 | choHof1 | - | A gene build method used by Ensembl for low coverage genomes, allowing genes to be annotated that span two scaffolds by mapping to the human gene.Projection build | - | -
Small tree finch | Camarhynchus parvulus | 87175 | Camarhynchus_parvulus_V1.1 | GCA_902806625.1 | Full genebuild | - | -
Sooty mangabey | Cercocebus atys | 9531 | Caty_1.0 | GCA_000955945.1 | Full genebuild | - | Y
Sperm whale | Physeter catodon | 9755 | ASM283717v2 | GCA_002837175.2 | Full genebuild | - | -
Spiny chromis | Acanthochromis polyacanthus | 80966 | ASM210954v1 | GCA_002109545.1 | Full genebuild | - | -
Spoon-billed sandpiper | Calidris pygmaea | 425635 | ASM369795v1 | GCA_003697955.1 | Full genebuild | - | -
Spotted gar | Lepisosteus oculatus | 7918 | LepOcu1 | GCA_000242695.1 | Full genebuild | - | -
Squirrel | Ictidomys tridecemlineatus | 43179 | SpeTri2.0 | GCA_000236235.1 | Full genebuild | - | -
Steppe mouse | Mus spicilegus | 10103 | MUSP714 | GCA_003336285.1 | Full genebuild | - | -
Stickleback | Gasterosteus aculeatus | 69293 | BROAD S1 | - | Full genebuild | - | -
Sumatran orangutan | Pongo abelii | 9601 | Susie_PABv2 | GCA_002880775.3 | Full genebuild | Y | -
Superb fairywren | Malurus cyaneus samueli | 2593467 | mCya_1.0 | GCA_009741485.1 | Full genebuild | - | -
Swainson's thrush | Catharus ustulatus | 91951 | bCatUst1.pri | GCA_009819885.1 | Full genebuild | - | -
Swamp eel | Monopterus albus | 43700 | M_albus_1.0 | GCA_001952655.1 | Full genebuild | - | -
Swan goose | Anser cygnoides | 8845 | GooseV1.0 | GCA_002166845.1 | Full genebuild | - | -
Tarsier | Carlito syrichta | 1868482 | Tarsius_syrichta-2.0.1 | GCA_000164805.2 | Full genebuild | - | Y
Tasmanian devil | Sarcophilus harrisii | 9305 | mSarHar1.11 | GCA_902635505.1 | Full genebuild | - | -
Tetraodon | Tetraodon nigroviridis | 99883 | TETRAODON 8.0 | - | Full genebuild | Y | -
Three-toed box turtle | Terrapene carolina triunguis | 2587831 | T_m_triunguis-2.0 | GCA_002925995.2 | Full genebuild | - | -
Tiger | Panthera tigris altaica | 74533 | PanTig1.0 | GCA_000464555.1 | Full genebuild | - | -
Tiger tail seahorse | Hippocampus comes | 109280 | H_comes_QL1_v1 | GCA_001891065.1 | Full genebuild | - | -
Tongue sole | Cynoglossus semilaevis | 244447 | Cse_v1.0 | GCA_000523025.1 | Full genebuild | - | -
Tree Shrew | Tupaia belangeri | 37347 | tupBel1 | - | A gene build method used by Ensembl for low coverage genomes, allowing genes to be annotated that span two scaffolds by mapping to the human gene.Projection build | - | -
Tropical clawed frog | Xenopus tropicalis | 8364 | UCB_Xtro_10.0 | GCA_000004195.4 | Full genebuild | - | -
Tuatara | Sphenodon punctatus | 8508 | ASM311381v1 | GCA_003113815.1 | Full genebuild | - | -
Turbot | Scophthalmus maximus | 52904 | ASM1334776v1 | GCA_013347765.1 | Full genebuild | - | Y
Turkey | Meleagris gallopavo | 9103 | Turkey_5.1 | GCA_000146605.4 | Full genebuild | Y | -
Turquoise killifish | Nothobranchius furzeri | 105023 | Nfu_20140520 | GCA_001465895.2 | Full genebuild | - | -
Ugandan red Colobus | Piliocolobus tephrosceles | 591936 | ASM277652v2 | GCA_002776525.2 | Full genebuild | - | Y
Upper Galilee mountains blind mole rat | Nannospalax galili | 1026970 | S.galili_v1.0 | GCA_000622305.1 | Full genebuild | - | Y
Vaquita | Phocoena sinus | 42100 | mPhoSin1.pri | GCA_008692025.1 | Full genebuild | - | -
Vervet-AGM | Chlorocebus sabaeus | 60711 | ChlSab1.1 | GCA_000409795.2 | Full genebuild | Y | -
Wallaby | Notamacropus eugenii | 9315 | Meug_1.0 | GCA_000004035.1 | A gene build method used by Ensembl for low coverage genomes, allowing genes to be annotated that span two scaffolds by mapping to the human gene.Projection build | - | -
West African mud turtle | Pelusios castaneus | 367368 | Pelusios_castaneus-1.0 | GCA_007922175.1 | Full genebuild | - | -
Western mosquitofish | Gambusia affinis | 33528 | ASM309773v1 | GCA_003097735.1 | Full genebuild | - | -
White-throated sparrow | Zonotrichia albicollis | 44394 | Zonotrichia_albicollis-1.0.1 | GCA_000385455.1 | Full genebuild | - | -
White-tufted-ear marmoset | Callithrix jacchus | 9483 | mCalJac1.pat.X | GCA_011100555.1 | Full genebuild | Y | Y
Wild yak | Bos mutus | 72004 | BosGru_v2.0 | GCA_000298355.1 | Full genebuild | - | -
Yarkand deer | Cervus hanglu yarkandensis | 84702 | CEY_v1 | GCA_010411085.1 | Full genebuild | - | -
Yellow-billed parrot | Amazona collaria | 241587 | ASM394721v1 | GCA_003947215.1 | Full genebuild | - | -
Yellowtail amberjack | Seriola lalandi dorsalis | 1841481 | Sedor1 | GCA_002814215.1 | Full genebuild | - | -
Zebra finch | Taeniopygia guttata | 59729 | bTaeGut1_v1.p | GCA_003957565.2 | Full genebuild | Y | -
Zebra mbuna | Maylandia zebra | 106582 | M_zebra_UMD2a | GCA_000238955.5 | Full genebuild | - | -
Zebrafish | Danio rerio | 7955 | GRCz11 | GCA_000002035.4 | Full genebuild | Y | Y
Zig-zag eel | Mastacembelus armatus | 205130 | fMasArm1.2 | GCA_900324485.2 | Full genebuild | - | -

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