{
  "title": "Stop using biocLite(). Instead: 1. Install BiocManager from CRAN. https://t.co/Gc94FRJpJt 2. Install Bioconductor or CRAN packages with one command: BiocManager::install(c(\"limma\", \"knitr\")) More info: https://t.co/IyN0LBSoa1 #Bioconductor #Rstats #bioc2018",
  "date": "2018-07-27"
}

# blogdown

> **Maëlle Salmon 🐟** (@ma_salmon; 15/1): @shermstats See https://t.co/FeZfxBo72L by @dataandme  [&#8618;](https://twitter.com/xieyihui/status/1022344107136638976)

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> **Nick Strayer** (@NicholasStrayer; 2/1): Super speed hexagons!  Playing around in #rstats with CPRNs to get a neural network to draw the blogdown hex sticker from memory. Idea taken from Emily Reif's wonderful observable notebook https://t.co/Nhp2sdm0dP https://t.co/qqlw4yzunt #DeepLearning https://t.co/7F1PKndnMr  [&#8618;](https://twitter.com/xieyihui/status/1022599927850041347)

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> **Alyssa Goldberg** (@WireMonkey; 2/0): Hey #rstats or @RLadiesNYC , ever have a blind spot in your learning that you just can't seem to get past?  I'm willing to trade knitting instruction or basic sewing instruction if someone can finally help me get blogdown going properly.  [&#8618;](https://twitter.com/xieyihui/status/1022503010616926208)

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> **Ming Tang** (@tangming2005; 2/0): @xieyihui @SBAmin @letsencrypt @Netlify working now! thanks! now visit the site safely (at least make you feel) https://t.co/I1yq5aLvSt  [&#8618;](https://twitter.com/xieyihui/status/1022322063191810048)

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> **Gina Reynolds** (@EvaMaeRey; 1/0): @ahalterman @apreshill's guide helped me get up and running with @xieyihui's, @rstudio's blogdown --- a wonderful tool!   https://t.co/tDFm3Nz1cN  [&#8618;](https://twitter.com/xieyihui/status/1022634358233083904)

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> **Houston Haynes** (@whiskersedge; 1/0): Hey Twitterpeeps, are there any #Microsoft @VSTS experts that have created a custom agent to built to build #blogdown and/or @GoHugoIO projects? Asking for a friend... #Azure @AzureStoreage #rstats #rstudio @code @Highcharts #machinelearning #datascience #continuousintegration  [&#8618;](https://twitter.com/xieyihui/status/1022505316276043782)

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> **Houston Haynes** (@whiskersedge; 0/1): I've built quite a few @Highcharts native" plots but this is my first foray into R and #blogdown ...🎩-tip to @dantonnoriega for the excellent primer: https://t.co/SVBP4afmpt #rstats #tidyverse  [&#8618;](https://twitter.com/xieyihui/status/1022517833761255424)

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> **William Chase** (@W_R_Chase; 0/0): What an incredible resource! I use rmarkdown to write research notes and reports, and I use blogdown to build my personal website. At the pace they're releasing these new features, it feels like my entire computing experience will happen through #rstudio soon https://t.co/95W2g4Bezi  [&#8618;](https://twitter.com/xieyihui/status/1022590720815849477)

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# bookdown

> **Yihui Xie** (@xieyihui; 7/2): @jdatap Nice!! Do you want to submit a pull request to add it to https://t.co/L67thLmauB? Instructions here: https://t.co/A4JDFtedun (BTW, @dataandme is the center of the #rstats twitterverse as we would've expected: https://t.co/MWJ1y7TU6f)  [&#8618;](https://twitter.com/xieyihui/status/1022579466634190859)

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> **SudhirVoleti** (@Sudhir_Voleti; 4/0): I hereby resolve to build a bookdown of my R work in my course materials and make it available. 
>
Not just yet though, need more to make a book out of, IMHO. https://t.co/34vInocf55  [&#8618;](https://twitter.com/xieyihui/status/1022373796508880897)

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> **Andrew Clark** (@pssGuy; 3/2): Bookdown with a twist. More entertainment than instruction
#PremierLeague 2017/18 week-by-week Annual with 100+ interactive charts and tables + embedded #rstats code
https://t.co/7ZggOblLVa
h/t @xieyihui @cpsievert @rstudio @plotlygraphs https://t.co/94v30zT7E5  [&#8618;](https://twitter.com/xieyihui/status/1022535506721103873)

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> **Matt Crump** (@MattCrump_; 3/0): Looking for lightweight way to embed quiz questions in R Markdown WITHOUT shiny, something like this https://t.co/REeBZcYVSG with the learnr package, but without shiny (already can do it with shiny), please reply if you know of one...  [&#8618;](https://twitter.com/xieyihui/status/1022457536740577287)

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> **Captain Splatter, USN (Ret.)** (@znmeb; 3/0): @xieyihui @larnsce @chrisderv @ustcer_ztc The new https://t.co/4XE6gbYbFy site looks great!  [&#8618;](https://twitter.com/xieyihui/status/1022363530803130368)

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> **John Pickering** (@kiwiskiNZ; 1/1): Just checked out https://t.co/SQMq7p9xLW  Some great texts for #rstats and #dataviz - a draft of Data Visualization: A practical introduction by Kieran Healy looks particularly good  https://t.co/2gr36n3CXF  [&#8618;](https://twitter.com/xieyihui/status/1022347315359571968)

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> **Shawn Graham** (@electricarchaeo; 1/0): #odate is being created with #bookdown https://t.co/n52yAWHclD  [&#8618;](https://twitter.com/xieyihui/status/1022450765376483328)

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> **Marco Zanotti** (@mzano17; 0/0): #RStudio https://t.co/G8yHjJpLtG  [&#8618;](https://twitter.com/xieyihui/status/1022596697246060550)

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> **Amarjeet Sahoo** (@sahooamarjeet; 0/0): 200 free and open-source books! Learn more about how you can contribute more books to https://t.co/5WkQs5rd5N https://t.co/UD5Ihdvwz6  [&#8618;](https://twitter.com/xieyihui/status/1022577885750673408)

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> **K.M.** (@kojimizu1028; 0/0): Bookdownでここまでonline sourceが公開されてるのすごすぎるな、、  [&#8618;](https://twitter.com/xieyihui/status/1022415044842151936)

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> **نور سعيد الشاخوري** (@nouralshakhouri; 0/0): The Revamped https://t.co/71TykZACm4 Website: https://t.co/JFcmgMcxac  [&#8618;](https://twitter.com/xieyihui/status/1022377809719840768)

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> **Robin Senge** (@senge; 0/0): Writing a #science #book or article containing lots of #MachineLearning or #Statistics  stuff? Try writing it with ⁦@rstudio⁩.  https://t.co/IL9F7CloXC  [&#8618;](https://twitter.com/xieyihui/status/1022353598137741312)

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# knitr

> **Stephen Turner** (@strnr; 253/107): Stop using biocLite(). Instead:
>
1. Install BiocManager from CRAN. https://t.co/Gc94FRJpJt
>
2. Install Bioconductor or CRAN packages with one command:
BiocManager::install(c("limma", "knitr"))
>
More info: https://t.co/IyN0LBSoa1
>
#Bioconductor #Rstats #bioc2018  [&#8618;](https://twitter.com/xieyihui/status/1022451016736927745)

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> **niszet📚** (@niszet0; 6/1): skimr::skim() can be rendered correctly by using  knitr::kable() even if you use Windows
(R) knitr 時に skimr::skim()…
https://t.co/pwWsH4aqp8  [&#8618;](https://twitter.com/xieyihui/status/1022610055621824512)

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> **Phil Wilmarth** (@pwilmarth; 4/2): The talk I gave at the 2018 Cascadia Proteomics Symposium is now up on Github: 
>
https://t.co/UOiINSCb14
>
If you have an interest in how Jupyter notebooks (or R Markdown and knitr) can be used in proteomics, check it out.  [&#8618;](https://twitter.com/xieyihui/status/1022633158183776259)

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> **William Ryan** (@thewilliamryan; 3/0): @Flavio_Azevedo_ @adamcchang @biorxivpreprint @jacuzzijo @TumkayaTayfun @_sameeraryal @EstimationStats From the site it looks like they’re working on an R package atm. In the meantime, if you use knitr you can use the Python version. (Or if you use python/Matlab, it’s available there already)  [&#8618;](https://twitter.com/xieyihui/status/1022634380882149376)

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> **Chitu Okoli** (@tripartio; 0/0): Weird errors when knitting R Markdown even though the errors don't appear when running the file normally? Try to clear the knitting cache (Knit submenu | Clear Knitr Cache...). #rmarkdown #rstudio  [&#8618;](https://twitter.com/xieyihui/status/1022522765264527360)

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# xaringan

> **Charles T. Gray** (@cantabile; 7/1): Hey tweeps, I'm about to go on tour with social enterprise @codelikeagirlau. It would be awesome to have some hexes to give out. Any ideas how to get some?
>
I'll be coding live from @rstudio using @RLadiesGlobal themed @xieyihui xaringan presentation. 
>
https://t.co/iF1aE5AaR3  [&#8618;](https://twitter.com/xieyihui/status/1022635706273787906)

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> **Nan Xiao** (@road2stat; 1/0): Five years ago, we finish the slide deck 3-7 days before a talk. Three years ago, we try to finish 1 day early. Today, with the help of @xieyihui's xaringan, we can make slides live while giving the talk! Speaking of which, I shouldn't be tweeting right now... 🤫 #JSM2018 https://t.co/tKwKP2QePa  [&#8618;](https://twitter.com/xieyihui/status/1022661825635274753)

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> **Thomas Speidel** (@ThomasSpeidel; 1/0): @f2harrell @jent103 Yihui xaringan package!  [&#8618;](https://twitter.com/xieyihui/status/1022464922603536384)

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